noone@mail.com Analysis of Dieting study 16S data % Fri Sep 7 05:46:18 2018
Plots are shown with relation to various combinations of meta data variables and in different graphical representations. Lots of plots here.
The same data are shown in multiple combinations of graphical representations. This is the same data, but each plot highlights slightly different aspects of it. It is not likely that you will need every plot - pick only what you need.
(1.6.1.2.5.2.2.2.1.1.0) Table 355. Data table used for plots. Data grouped by visit,Drug.Before.Diet. Showing only 200 first rows. Full dataset is also saved in a delimited text file (click to download and open e.g. in Excel) data/1.6.1.2.5.2.2.2.1.1.0-32336bf1689.1.6.1.2.5.2.2.2.1.1.csv
| .record.id | visit | Drug.Before.Diet | feature | Abundance |
|---|---|---|---|---|
| SM1 | 1 | DrugBefore_YES | Bacteroidales | 7.837e-01 |
| SM10 | 3 | DrugBefore_YES | Bacteroidales | 2.396e-01 |
| SM100 | 4 | DrugBefore_YES | Bacteroidales | 5.483e-01 |
| SM11 | 2 | DrugBefore_YES | Bacteroidales | 9.084e-01 |
| SM12 | 1 | DrugBefore_YES | Bacteroidales | 9.279e-01 |
| SM13 | 1 | DrugBefore_NO | Bacteroidales | 7.549e-01 |
| SM14 | 1 | DrugBefore_NO | Bacteroidales | 6.361e-02 |
| SM16 | 4 | DrugBefore_NO | Bacteroidales | 3.910e-01 |
| SM17 | 1 | DrugBefore_YES | Bacteroidales | 8.184e-01 |
| SM18 | 2 | DrugBefore_NO | Bacteroidales | 7.195e-01 |
| SM19 | 2 | DrugBefore_NO | Bacteroidales | 2.254e-01 |
| SM2 | 1 | DrugBefore_NO | Bacteroidales | 8.870e-01 |
| SM21 | 1 | DrugBefore_NO | Bacteroidales | 5.680e-01 |
| SM22 | 1 | DrugBefore_YES | Bacteroidales | 6.107e-01 |
| SM23 | 2 | DrugBefore_YES | Bacteroidales | 2.816e-01 |
| SM24 | 1 | DrugBefore_NO | Bacteroidales | 8.665e-01 |
| SM25 | 4 | DrugBefore_NO | Bacteroidales | 4.540e-01 |
| SM29 | 3 | DrugBefore_YES | Bacteroidales | 9.319e-01 |
| SM3 | 2 | DrugBefore_YES | Bacteroidales | 3.066e-01 |
| SM30 | 4 | DrugBefore_YES | Bacteroidales | 6.906e-02 |
| SM33 | 1 | DrugBefore_YES | Bacteroidales | 6.904e-01 |
| SM36 | 4 | DrugBefore_NO | Bacteroidales | 3.219e-04 |
| SM38 | 2 | DrugBefore_YES | Bacteroidales | 9.845e-01 |
| SM39 | 1 | DrugBefore_NO | Bacteroidales | 9.342e-01 |
| SM40 | 4 | DrugBefore_NO | Bacteroidales | 7.285e-01 |
| SM41 | 1 | DrugBefore_YES | Bacteroidales | 5.559e-01 |
| SM42 | 4 | DrugBefore_NO | Bacteroidales | 7.114e-01 |
| SM43 | 4 | DrugBefore_YES | Bacteroidales | 7.229e-01 |
| SM45 | 2 | DrugBefore_NO | Bacteroidales | 0.000e+00 |
| SM49 | 1 | DrugBefore_YES | Bacteroidales | 9.322e-01 |
| SM5 | 3 | DrugBefore_YES | Bacteroidales | 8.376e-01 |
| SM50 | 3 | DrugBefore_NO | Bacteroidales | 0.000e+00 |
| SM51 | 4 | DrugBefore_YES | Bacteroidales | 7.147e-01 |
| SM52 | 1 | DrugBefore_NO | Bacteroidales | 9.827e-02 |
| SM53 | 2 | DrugBefore_YES | Bacteroidales | 8.029e-01 |
| SM54 | 3 | DrugBefore_YES | Bacteroidales | 8.090e-01 |
| SM56 | 2 | DrugBefore_YES | Bacteroidales | 7.317e-01 |
| SM57 | 1 | DrugBefore_YES | Bacteroidales | 9.046e-01 |
| SM58 | 2 | DrugBefore_NO | Bacteroidales | 7.692e-01 |
| SM59 | 3 | DrugBefore_NO | Bacteroidales | 5.768e-02 |
| SM60 | 3 | DrugBefore_YES | Bacteroidales | 8.475e-01 |
| SM62 | 1 | DrugBefore_YES | Bacteroidales | 9.715e-01 |
| SM64 | 2 | DrugBefore_YES | Bacteroidales | 8.683e-01 |
| SM65 | 3 | DrugBefore_YES | Bacteroidales | 3.741e-01 |
| SM67 | 4 | DrugBefore_YES | Bacteroidales | 9.138e-01 |
| SM68 | 4 | DrugBefore_NO | Bacteroidales | 1.705e-01 |
| SM69 | 4 | DrugBefore_YES | Bacteroidales | 8.374e-01 |
| SM71 | 3 | DrugBefore_YES | Bacteroidales | 9.175e-01 |
| SM73 | 1 | DrugBefore_NO | Bacteroidales | 8.563e-01 |
| SM75 | 3 | DrugBefore_NO | Bacteroidales | 2.377e-03 |
| SM77 | 2 | DrugBefore_YES | Bacteroidales | 7.635e-01 |
| SM79 | 2 | DrugBefore_NO | Bacteroidales | 8.495e-01 |
| SM8 | 1 | DrugBefore_NO | Bacteroidales | 8.250e-01 |
| SM82 | 4 | DrugBefore_YES | Bacteroidales | 9.555e-01 |
| SM83 | 1 | DrugBefore_YES | Bacteroidales | 8.254e-01 |
| SM84 | 1 | DrugBefore_YES | Bacteroidales | 8.858e-01 |
| SM86 | 2 | DrugBefore_YES | Bacteroidales | 2.792e-03 |
| SM87 | 1 | DrugBefore_YES | Bacteroidales | 8.668e-01 |
| SM88 | 2 | DrugBefore_YES | Bacteroidales | 8.385e-01 |
| SM9 | 2 | DrugBefore_NO | Bacteroidales | 6.635e-01 |
| SM90 | 2 | DrugBefore_NO | Bacteroidales | 6.176e-01 |
| SM91 | 3 | DrugBefore_YES | Bacteroidales | 7.223e-01 |
| SM92 | 3 | DrugBefore_NO | Bacteroidales | 8.864e-01 |
| SM93 | 1 | DrugBefore_YES | Bacteroidales | 7.781e-01 |
| SM96 | 1 | DrugBefore_NO | Bacteroidales | 6.376e-01 |
| SM98 | 3 | DrugBefore_NO | Bacteroidales | 8.378e-01 |
| SM99 | 3 | DrugBefore_NO | Bacteroidales | 6.951e-01 |
| SM1 | 1 | DrugBefore_YES | Clostridiales | 1.709e-01 |
| SM10 | 3 | DrugBefore_YES | Clostridiales | 7.097e-01 |
| SM100 | 4 | DrugBefore_YES | Clostridiales | 4.044e-01 |
| SM11 | 2 | DrugBefore_YES | Clostridiales | 6.923e-02 |
| SM12 | 1 | DrugBefore_YES | Clostridiales | 6.299e-02 |
| SM13 | 1 | DrugBefore_NO | Clostridiales | 1.670e-01 |
| SM14 | 1 | DrugBefore_NO | Clostridiales | 3.018e-01 |
| SM16 | 4 | DrugBefore_NO | Clostridiales | 5.717e-01 |
| SM17 | 1 | DrugBefore_YES | Clostridiales | 1.038e-01 |
| SM18 | 2 | DrugBefore_NO | Clostridiales | 9.552e-02 |
| SM19 | 2 | DrugBefore_NO | Clostridiales | 7.154e-01 |
| SM2 | 1 | DrugBefore_NO | Clostridiales | 2.821e-02 |
| SM21 | 1 | DrugBefore_NO | Clostridiales | 3.925e-01 |
| SM22 | 1 | DrugBefore_YES | Clostridiales | 2.891e-01 |
| SM23 | 2 | DrugBefore_YES | Clostridiales | 1.659e-03 |
| SM24 | 1 | DrugBefore_NO | Clostridiales | 8.129e-02 |
| SM25 | 4 | DrugBefore_NO | Clostridiales | 5.006e-01 |
| SM29 | 3 | DrugBefore_YES | Clostridiales | 5.931e-02 |
| SM3 | 2 | DrugBefore_YES | Clostridiales | 6.225e-01 |
| SM30 | 4 | DrugBefore_YES | Clostridiales | 6.076e-01 |
| SM33 | 1 | DrugBefore_YES | Clostridiales | 4.996e-02 |
| SM36 | 4 | DrugBefore_NO | Clostridiales | 7.193e-01 |
| SM38 | 2 | DrugBefore_YES | Clostridiales | 1.115e-02 |
| SM39 | 1 | DrugBefore_NO | Clostridiales | 4.334e-02 |
| SM40 | 4 | DrugBefore_NO | Clostridiales | 1.535e-01 |
| SM41 | 1 | DrugBefore_YES | Clostridiales | 1.723e-01 |
| SM42 | 4 | DrugBefore_NO | Clostridiales | 2.559e-01 |
| SM43 | 4 | DrugBefore_YES | Clostridiales | 1.955e-01 |
| SM45 | 2 | DrugBefore_NO | Clostridiales | 0.000e+00 |
| SM49 | 1 | DrugBefore_YES | Clostridiales | 5.216e-02 |
| SM5 | 3 | DrugBefore_YES | Clostridiales | 9.120e-02 |
| SM50 | 3 | DrugBefore_NO | Clostridiales | 7.065e-01 |
| SM51 | 4 | DrugBefore_YES | Clostridiales | 1.970e-01 |
| SM52 | 1 | DrugBefore_NO | Clostridiales | 6.445e-01 |
| SM53 | 2 | DrugBefore_YES | Clostridiales | 1.491e-01 |
| SM54 | 3 | DrugBefore_YES | Clostridiales | 1.726e-01 |
| SM56 | 2 | DrugBefore_YES | Clostridiales | 2.125e-01 |
| SM57 | 1 | DrugBefore_YES | Clostridiales | 8.819e-02 |
| SM58 | 2 | DrugBefore_NO | Clostridiales | 1.200e-01 |
| SM59 | 3 | DrugBefore_NO | Clostridiales | 7.978e-01 |
| SM60 | 3 | DrugBefore_YES | Clostridiales | 6.399e-02 |
| SM62 | 1 | DrugBefore_YES | Clostridiales | 2.529e-02 |
| SM64 | 2 | DrugBefore_YES | Clostridiales | 7.026e-02 |
| SM65 | 3 | DrugBefore_YES | Clostridiales | 5.640e-01 |
| SM67 | 4 | DrugBefore_YES | Clostridiales | 7.164e-02 |
| SM68 | 4 | DrugBefore_NO | Clostridiales | 5.874e-01 |
| SM69 | 4 | DrugBefore_YES | Clostridiales | 1.229e-01 |
| SM71 | 3 | DrugBefore_YES | Clostridiales | 5.366e-02 |
| SM73 | 1 | DrugBefore_NO | Clostridiales | 9.994e-02 |
| SM75 | 3 | DrugBefore_NO | Clostridiales | 8.122e-01 |
| SM77 | 2 | DrugBefore_YES | Clostridiales | 1.921e-01 |
| SM79 | 2 | DrugBefore_NO | Clostridiales | 1.412e-01 |
| SM8 | 1 | DrugBefore_NO | Clostridiales | 1.294e-01 |
| SM82 | 4 | DrugBefore_YES | Clostridiales | 2.914e-02 |
| SM83 | 1 | DrugBefore_YES | Clostridiales | 1.565e-01 |
| SM84 | 1 | DrugBefore_YES | Clostridiales | 5.785e-02 |
| SM86 | 2 | DrugBefore_YES | Clostridiales | 8.889e-01 |
| SM87 | 1 | DrugBefore_YES | Clostridiales | 7.040e-02 |
| SM88 | 2 | DrugBefore_YES | Clostridiales | 1.247e-01 |
| SM9 | 2 | DrugBefore_NO | Clostridiales | 7.939e-02 |
| SM90 | 2 | DrugBefore_NO | Clostridiales | 2.991e-01 |
| SM91 | 3 | DrugBefore_YES | Clostridiales | 2.006e-01 |
| SM92 | 3 | DrugBefore_NO | Clostridiales | 8.090e-02 |
| SM93 | 1 | DrugBefore_YES | Clostridiales | 1.938e-01 |
| SM96 | 1 | DrugBefore_NO | Clostridiales | 2.363e-01 |
| SM98 | 3 | DrugBefore_NO | Clostridiales | 5.983e-02 |
| SM99 | 3 | DrugBefore_NO | Clostridiales | 2.487e-01 |
| SM1 | 1 | DrugBefore_YES | Lactobacillales | 4.329e-04 |
| SM10 | 3 | DrugBefore_YES | Lactobacillales | 4.240e-04 |
| SM100 | 4 | DrugBefore_YES | Lactobacillales | 3.077e-04 |
| SM11 | 2 | DrugBefore_YES | Lactobacillales | 6.567e-04 |
| SM12 | 1 | DrugBefore_YES | Lactobacillales | 8.853e-05 |
| SM13 | 1 | DrugBefore_NO | Lactobacillales | 0.000e+00 |
| SM14 | 1 | DrugBefore_NO | Lactobacillales | 1.905e-01 |
| SM16 | 4 | DrugBefore_NO | Lactobacillales | 4.875e-03 |
| SM17 | 1 | DrugBefore_YES | Lactobacillales | 1.241e-03 |
| SM18 | 2 | DrugBefore_NO | Lactobacillales | 1.242e-02 |
| SM19 | 2 | DrugBefore_NO | Lactobacillales | 1.388e-03 |
| SM2 | 1 | DrugBefore_NO | Lactobacillales | 7.278e-02 |
| SM21 | 1 | DrugBefore_NO | Lactobacillales | 2.690e-03 |
| SM22 | 1 | DrugBefore_YES | Lactobacillales | 3.071e-03 |
| SM23 | 2 | DrugBefore_YES | Lactobacillales | 7.105e-01 |
| SM24 | 1 | DrugBefore_NO | Lactobacillales | 6.431e-04 |
| SM25 | 4 | DrugBefore_NO | Lactobacillales | 7.765e-03 |
| SM29 | 3 | DrugBefore_YES | Lactobacillales | 0.000e+00 |
| SM3 | 2 | DrugBefore_YES | Lactobacillales | 8.146e-03 |
| SM30 | 4 | DrugBefore_YES | Lactobacillales | 7.637e-03 |
| SM33 | 1 | DrugBefore_YES | Lactobacillales | 7.868e-04 |
| SM36 | 4 | DrugBefore_NO | Lactobacillales | 6.437e-04 |
| SM38 | 2 | DrugBefore_YES | Lactobacillales | 3.545e-03 |
| SM39 | 1 | DrugBefore_NO | Lactobacillales | 1.821e-04 |
| SM40 | 4 | DrugBefore_NO | Lactobacillales | 4.625e-04 |
| SM41 | 1 | DrugBefore_YES | Lactobacillales | 4.831e-03 |
| SM42 | 4 | DrugBefore_NO | Lactobacillales | 2.497e-04 |
| SM43 | 4 | DrugBefore_YES | Lactobacillales | 2.981e-04 |
| SM45 | 2 | DrugBefore_NO | Lactobacillales | 9.998e-01 |
| SM49 | 1 | DrugBefore_YES | Lactobacillales | 3.316e-03 |
| SM5 | 3 | DrugBefore_YES | Lactobacillales | 9.324e-04 |
| SM50 | 3 | DrugBefore_NO | Lactobacillales | 1.578e-03 |
| SM51 | 4 | DrugBefore_YES | Lactobacillales | 4.461e-04 |
| SM52 | 1 | DrugBefore_NO | Lactobacillales | 2.321e-02 |
| SM53 | 2 | DrugBefore_YES | Lactobacillales | 7.192e-05 |
| SM54 | 3 | DrugBefore_YES | Lactobacillales | 0.000e+00 |
| SM56 | 2 | DrugBefore_YES | Lactobacillales | 0.000e+00 |
| SM57 | 1 | DrugBefore_YES | Lactobacillales | 0.000e+00 |
| SM58 | 2 | DrugBefore_NO | Lactobacillales | 3.563e-03 |
| SM59 | 3 | DrugBefore_NO | Lactobacillales | 8.989e-03 |
| SM60 | 3 | DrugBefore_YES | Lactobacillales | 3.404e-04 |
| SM62 | 1 | DrugBefore_YES | Lactobacillales | 1.606e-03 |
| SM64 | 2 | DrugBefore_YES | Lactobacillales | 5.011e-04 |
| SM65 | 3 | DrugBefore_YES | Lactobacillales | 9.617e-04 |
| SM67 | 4 | DrugBefore_YES | Lactobacillales | 5.882e-05 |
| SM68 | 4 | DrugBefore_NO | Lactobacillales | 1.153e-02 |
| SM69 | 4 | DrugBefore_YES | Lactobacillales | 1.554e-04 |
| SM71 | 3 | DrugBefore_YES | Lactobacillales | 1.253e-03 |
| SM73 | 1 | DrugBefore_NO | Lactobacillales | 1.514e-04 |
| SM75 | 3 | DrugBefore_NO | Lactobacillales | 6.655e-02 |
| SM77 | 2 | DrugBefore_YES | Lactobacillales | 2.816e-04 |
| SM79 | 2 | DrugBefore_NO | Lactobacillales | 8.808e-04 |
| SM8 | 1 | DrugBefore_NO | Lactobacillales | 1.483e-03 |
| SM82 | 4 | DrugBefore_YES | Lactobacillales | 2.293e-03 |
| SM83 | 1 | DrugBefore_YES | Lactobacillales | 0.000e+00 |
| SM84 | 1 | DrugBefore_YES | Lactobacillales | 9.707e-05 |
| SM86 | 2 | DrugBefore_YES | Lactobacillales | 8.067e-03 |
| SM87 | 1 | DrugBefore_YES | Lactobacillales | 3.805e-04 |
| SM88 | 2 | DrugBefore_YES | Lactobacillales | 8.525e-05 |
| SM9 | 2 | DrugBefore_NO | Lactobacillales | 1.645e-03 |
| SM90 | 2 | DrugBefore_NO | Lactobacillales | 4.125e-04 |
| SM91 | 3 | DrugBefore_YES | Lactobacillales | 1.401e-03 |
| SM92 | 3 | DrugBefore_NO | Lactobacillales | 0.000e+00 |
| SM93 | 1 | DrugBefore_YES | Lactobacillales | 1.345e-04 |
| SM96 | 1 | DrugBefore_NO | Lactobacillales | 1.443e-03 |
| SM98 | 3 | DrugBefore_NO | Lactobacillales | 5.408e-04 |
(1.6.1.2.5.2.2.2.1.1.1) Widget 372. Dynamic Pivot Table link (drag and drop field names and pick averaging functions or plot types; click on fields or legend elements to filter values). Starting rendering is Stacked Bar Chart. Data grouped by visit,Drug.Before.Diet. Click to see HTML widget file in full window: ./1.6.1.2.5.2.2.2.1.1.1-3232d4e686bDynamic.Pivot.Table.html
(1.6.1.2.5.2.2.2.1.1.1) Widget 373. Dynamic Pivot Table link (drag and drop field names and pick averaging functions or plot types; click on fields or legend elements to filter values). Starting rendering is Table Barchart. Data grouped by visit,Drug.Before.Diet. Click to see HTML widget file in full window: ./1.6.1.2.5.2.2.2.1.1.1-32367884a19Dynamic.Pivot.Table.html
(1.6.1.2.5.2.2.2.1.1.1) Table 356. Summary table. Data grouped by visit,Drug.Before.Diet. Full dataset is also saved in a delimited text file (click to download and open e.g. in Excel) data/1.6.1.2.5.2.2.2.1.1.1-32327144bd9.1.6.1.2.5.2.2.2.1.1.csv
| feature | visit | Drug.Before.Diet | mean | sd | median | incidence |
|---|---|---|---|---|---|---|
| Bacteroidales | 1 | DrugBefore_NO | 6.491e-01 | 3.203e-01 | 7.900e-01 | 1.0000 |
| Bacteroidales | 1 | DrugBefore_YES | 8.116e-01 | 1.270e-01 | 8.254e-01 | 1.0000 |
| Bacteroidales | 2 | DrugBefore_NO | 5.492e-01 | 3.141e-01 | 6.635e-01 | 0.8571 |
| Bacteroidales | 2 | DrugBefore_YES | 6.489e-01 | 3.295e-01 | 7.832e-01 | 1.0000 |
| Bacteroidales | 3 | DrugBefore_NO | 4.132e-01 | 4.358e-01 | 3.764e-01 | 0.8333 |
| Bacteroidales | 3 | DrugBefore_YES | 7.099e-01 | 2.596e-01 | 8.233e-01 | 1.0000 |
| Bacteroidales | 4 | DrugBefore_NO | 4.093e-01 | 2.898e-01 | 4.225e-01 | 1.0000 |
| Bacteroidales | 4 | DrugBefore_YES | 6.803e-01 | 3.025e-01 | 7.229e-01 | 1.0000 |
| Clostridiales | 1 | DrugBefore_NO | 2.124e-01 | 1.912e-01 | 1.482e-01 | 1.0000 |
| Clostridiales | 1 | DrugBefore_YES | 1.149e-01 | 7.620e-02 | 8.819e-02 | 1.0000 |
| Clostridiales | 2 | DrugBefore_NO | 2.072e-01 | 2.417e-01 | 1.200e-01 | 0.8571 |
| Clostridiales | 2 | DrugBefore_YES | 2.342e-01 | 2.904e-01 | 1.369e-01 | 1.0000 |
| Clostridiales | 3 | DrugBefore_NO | 4.510e-01 | 3.597e-01 | 4.776e-01 | 1.0000 |
| Clostridiales | 3 | DrugBefore_YES | 2.394e-01 | 2.542e-01 | 1.319e-01 | 1.0000 |
| Clostridiales | 4 | DrugBefore_NO | 4.647e-01 | 2.159e-01 | 5.361e-01 | 1.0000 |
| Clostridiales | 4 | DrugBefore_YES | 2.326e-01 | 2.050e-01 | 1.955e-01 | 1.0000 |
| Lactobacillales | 1 | DrugBefore_NO | 2.930e-02 | 6.104e-02 | 1.463e-03 | 0.9000 |
| Lactobacillales | 1 | DrugBefore_YES | 1.230e-03 | 1.560e-03 | 4.329e-04 | 0.8462 |
| Lactobacillales | 2 | DrugBefore_NO | 1.457e-01 | 3.766e-01 | 1.645e-03 | 1.0000 |
| Lactobacillales | 2 | DrugBefore_YES | 7.318e-02 | 2.240e-01 | 5.789e-04 | 0.9000 |
| Lactobacillales | 3 | DrugBefore_NO | 1.300e-02 | 2.645e-02 | 1.059e-03 | 0.8333 |
| Lactobacillales | 3 | DrugBefore_YES | 6.641e-04 | 5.471e-04 | 6.782e-04 | 0.7500 |
| Lactobacillales | 4 | DrugBefore_NO | 4.254e-03 | 4.671e-03 | 2.759e-03 | 1.0000 |
| Lactobacillales | 4 | DrugBefore_YES | 1.600e-03 | 2.772e-03 | 3.077e-04 | 1.0000 |
| Erysipelotrichales | 1 | DrugBefore_NO | 4.869e-02 | 1.198e-01 | 9.058e-03 | 1.0000 |
| Erysipelotrichales | 1 | DrugBefore_YES | 9.306e-03 | 8.918e-03 | 8.445e-03 | 0.8462 |
| Erysipelotrichales | 2 | DrugBefore_NO | 4.388e-03 | 6.426e-03 | 9.718e-04 | 0.7143 |
| Erysipelotrichales | 2 | DrugBefore_YES | 6.841e-03 | 9.988e-03 | 3.901e-03 | 1.0000 |
| Erysipelotrichales | 3 | DrugBefore_NO | 3.388e-02 | 3.662e-02 | 2.731e-02 | 1.0000 |
| Erysipelotrichales | 3 | DrugBefore_YES | 7.867e-03 | 1.024e-02 | 5.726e-03 | 1.0000 |
| Erysipelotrichales | 4 | DrugBefore_NO | 5.830e-02 | 9.802e-02 | 5.452e-03 | 1.0000 |
| Erysipelotrichales | 4 | DrugBefore_YES | 6.194e-03 | 4.422e-03 | 4.538e-03 | 1.0000 |
| Selenomonadales | 1 | DrugBefore_NO | 3.888e-03 | 6.406e-03 | 1.009e-03 | 0.9000 |
| Selenomonadales | 1 | DrugBefore_YES | 7.876e-03 | 1.648e-02 | 1.992e-03 | 0.9231 |
| Selenomonadales | 2 | DrugBefore_NO | 5.700e-02 | 8.202e-02 | 6.478e-03 | 0.8571 |
| Selenomonadales | 2 | DrugBefore_YES | 1.201e-02 | 2.200e-02 | 2.560e-03 | 0.7000 |
| Selenomonadales | 3 | DrugBefore_NO | 2.475e-02 | 3.301e-02 | 1.083e-02 | 0.8333 |
| Selenomonadales | 3 | DrugBefore_YES | 5.929e-03 | 6.142e-03 | 4.186e-03 | 0.7500 |
| Selenomonadales | 4 | DrugBefore_NO | 1.034e-02 | 9.712e-03 | 9.060e-03 | 1.0000 |
| Selenomonadales | 4 | DrugBefore_YES | 5.040e-03 | 6.779e-03 | 2.231e-04 | 0.8571 |
| Enterobacteriales | 1 | DrugBefore_NO | 1.535e-02 | 4.600e-02 | 1.286e-04 | 0.5000 |
| Enterobacteriales | 1 | DrugBefore_YES | 1.960e-02 | 6.575e-02 | 0.000e+00 | 0.4615 |
| Enterobacteriales | 2 | DrugBefore_NO | 2.289e-03 | 5.219e-03 | 4.125e-04 | 0.7143 |
| Enterobacteriales | 2 | DrugBefore_YES | 2.773e-03 | 6.325e-03 | 1.966e-04 | 0.6000 |
| Enterobacteriales | 3 | DrugBefore_NO | 1.166e-02 | 2.268e-02 | 3.416e-03 | 0.8333 |
| Enterobacteriales | 3 | DrugBefore_YES | 2.961e-03 | 7.095e-03 | 3.210e-04 | 0.6250 |
| Enterobacteriales | 4 | DrugBefore_NO | 2.257e-03 | 3.183e-03 | 4.479e-04 | 0.6667 |
| Enterobacteriales | 4 | DrugBefore_YES | 2.872e-02 | 3.464e-02 | 1.756e-02 | 0.7143 |
| Burkholderiales | 1 | DrugBefore_NO | 8.138e-03 | 1.165e-02 | 2.577e-03 | 1.0000 |
| Burkholderiales | 1 | DrugBefore_YES | 9.798e-03 | 1.692e-02 | 1.809e-03 | 0.6154 |
| Burkholderiales | 2 | DrugBefore_NO | 1.182e-02 | 1.576e-02 | 6.155e-03 | 0.5714 |
| Burkholderiales | 2 | DrugBefore_YES | 1.217e-02 | 1.922e-02 | 0.000e+00 | 0.4000 |
| Burkholderiales | 3 | DrugBefore_NO | 1.331e-03 | 3.080e-03 | 0.000e+00 | 0.3333 |
| Burkholderiales | 3 | DrugBefore_YES | 8.794e-03 | 1.629e-02 | 0.000e+00 | 0.2500 |
| Burkholderiales | 4 | DrugBefore_NO | 1.559e-02 | 3.336e-02 | 3.219e-04 | 0.5000 |
| Burkholderiales | 4 | DrugBefore_YES | 6.077e-03 | 1.459e-02 | 0.000e+00 | 0.4286 |
| Pasteurellales | 1 | DrugBefore_NO | 1.112e-03 | 2.563e-03 | 0.000e+00 | 0.4000 |
| Pasteurellales | 1 | DrugBefore_YES | 1.341e-04 | 2.383e-04 | 0.000e+00 | 0.3077 |
| Pasteurellales | 2 | DrugBefore_NO | 2.033e-03 | 2.334e-03 | 1.650e-03 | 0.8571 |
| Pasteurellales | 2 | DrugBefore_YES | 8.641e-04 | 1.785e-03 | 4.263e-05 | 0.5000 |
| Pasteurellales | 3 | DrugBefore_NO | 1.210e-02 | 2.139e-02 | 0.000e+00 | 0.3333 |
| Pasteurellales | 3 | DrugBefore_YES | 3.303e-03 | 4.806e-03 | 1.166e-03 | 0.6250 |
| Pasteurellales | 4 | DrugBefore_NO | 1.837e-02 | 3.979e-02 | 1.708e-03 | 0.8333 |
| Pasteurellales | 4 | DrugBefore_YES | 2.506e-02 | 6.562e-02 | 2.231e-04 | 0.7143 |
| Unclassified_Bacteria | 1 | DrugBefore_NO | 1.480e-02 | 2.717e-02 | 4.448e-03 | 1.0000 |
| Unclassified_Bacteria | 1 | DrugBefore_YES | 3.807e-03 | 4.164e-03 | 2.257e-03 | 0.9231 |
| Unclassified_Bacteria | 2 | DrugBefore_NO | 2.186e-03 | 2.207e-03 | 1.388e-03 | 0.8571 |
| Unclassified_Bacteria | 2 | DrugBefore_YES | 2.145e-03 | 1.812e-03 | 2.054e-03 | 0.9000 |
| Unclassified_Bacteria | 3 | DrugBefore_NO | 5.270e-03 | 3.824e-03 | 3.444e-03 | 1.0000 |
| Unclassified_Bacteria | 3 | DrugBefore_YES | 1.982e-03 | 1.537e-03 | 1.345e-03 | 1.0000 |
| Unclassified_Bacteria | 4 | DrugBefore_NO | 4.114e-03 | 4.251e-03 | 2.007e-03 | 1.0000 |
| Unclassified_Bacteria | 4 | DrugBefore_YES | 5.219e-03 | 8.370e-03 | 1.399e-03 | 1.0000 |
| Unclassified_Firmicutes | 1 | DrugBefore_NO | 2.802e-03 | 4.001e-03 | 1.172e-03 | 1.0000 |
| Unclassified_Firmicutes | 1 | DrugBefore_YES | 2.142e-03 | 2.989e-03 | 6.030e-04 | 0.7692 |
| Unclassified_Firmicutes | 2 | DrugBefore_NO | 1.103e-02 | 1.266e-02 | 7.867e-03 | 0.7143 |
| Unclassified_Firmicutes | 2 | DrugBefore_YES | 1.606e-03 | 2.074e-03 | 5.869e-04 | 0.8000 |
| Unclassified_Firmicutes | 3 | DrugBefore_NO | 1.975e-02 | 2.478e-02 | 1.006e-02 | 1.0000 |
| Unclassified_Firmicutes | 3 | DrugBefore_YES | 1.509e-03 | 1.271e-03 | 1.063e-03 | 1.0000 |
| Unclassified_Firmicutes | 4 | DrugBefore_NO | 7.886e-03 | 8.479e-03 | 4.579e-03 | 1.0000 |
| Unclassified_Firmicutes | 4 | DrugBefore_YES | 9.570e-04 | 1.257e-03 | 6.692e-04 | 0.8571 |
| Verrucomicrobiales | 1 | DrugBefore_NO | 6.661e-03 | 1.204e-02 | 0.000e+00 | 0.4000 |
| Verrucomicrobiales | 1 | DrugBefore_YES | 1.355e-02 | 4.857e-02 | 0.000e+00 | 0.3077 |
| Verrucomicrobiales | 2 | DrugBefore_NO | 4.125e-04 | 1.091e-03 | 0.000e+00 | 0.1429 |
| Verrucomicrobiales | 2 | DrugBefore_YES | 3.747e-04 | 1.185e-03 | 0.000e+00 | 0.1000 |
| Verrucomicrobiales | 3 | DrugBefore_NO | 1.873e-04 | 4.587e-04 | 0.000e+00 | 0.1667 |
| Verrucomicrobiales | 3 | DrugBefore_YES | 8.617e-04 | 2.437e-03 | 0.000e+00 | 0.1250 |
| Verrucomicrobiales | 4 | DrugBefore_NO | 6.167e-05 | 1.510e-04 | 0.000e+00 | 0.1667 |
| Verrucomicrobiales | 4 | DrugBefore_YES | 0.000e+00 | 0.000e+00 | 0.000e+00 | 0.0000 |
| Bifidobacteriales | 1 | DrugBefore_NO | 1.552e-03 | 3.211e-03 | 1.985e-04 | 0.7000 |
| Bifidobacteriales | 1 | DrugBefore_YES | 1.974e-03 | 5.715e-03 | 3.015e-04 | 0.6154 |
| Bifidobacteriales | 2 | DrugBefore_NO | 3.356e-04 | 6.091e-04 | 0.000e+00 | 0.4286 |
| Bifidobacteriales | 2 | DrugBefore_YES | 1.000e-03 | 2.405e-03 | 1.473e-04 | 0.7000 |
| Bifidobacteriales | 3 | DrugBefore_NO | 1.383e-03 | 3.177e-03 | 9.832e-05 | 0.5000 |
| Bifidobacteriales | 3 | DrugBefore_YES | 5.377e-03 | 8.782e-03 | 9.066e-04 | 0.6250 |
| Bifidobacteriales | 4 | DrugBefore_NO | 1.767e-03 | 3.919e-03 | 9.250e-05 | 0.5000 |
| Bifidobacteriales | 4 | DrugBefore_YES | 3.710e-03 | 6.004e-03 | 5.198e-04 | 0.7143 |
| Rhizobiales | 1 | DrugBefore_NO | 1.645e-03 | 2.271e-03 | 7.732e-04 | 0.6000 |
| Rhizobiales | 1 | DrugBefore_YES | 1.928e-03 | 3.638e-03 | 1.941e-04 | 0.5385 |
| Rhizobiales | 2 | DrugBefore_NO | 2.085e-03 | 4.800e-03 | 3.915e-04 | 0.7143 |
| Rhizobiales | 2 | DrugBefore_YES | 3.214e-03 | 5.669e-03 | 2.445e-04 | 0.6000 |
| Rhizobiales | 3 | DrugBefore_NO | 1.387e-04 | 3.398e-04 | 0.000e+00 | 0.1667 |
| Rhizobiales | 3 | DrugBefore_YES | 1.023e-03 | 2.663e-03 | 0.000e+00 | 0.2500 |
| Rhizobiales | 4 | DrugBefore_NO | 8.545e-04 | 1.534e-03 | 1.558e-04 | 0.5000 |
| Rhizobiales | 4 | DrugBefore_YES | 1.675e-03 | 4.194e-03 | 0.000e+00 | 0.4286 |
| Fusobacteriales | 1 | DrugBefore_NO | 3.652e-04 | 9.889e-04 | 0.000e+00 | 0.3000 |
| Fusobacteriales | 1 | DrugBefore_YES | 0.000e+00 | 0.000e+00 | 0.000e+00 | 0.0000 |
| Fusobacteriales | 2 | DrugBefore_NO | 5.194e-05 | 8.907e-05 | 0.000e+00 | 0.2857 |
| Fusobacteriales | 2 | DrugBefore_YES | 0.000e+00 | 0.000e+00 | 0.000e+00 | 0.0000 |
| Fusobacteriales | 3 | DrugBefore_NO | 4.375e-03 | 9.032e-03 | 0.000e+00 | 0.3333 |
| Fusobacteriales | 3 | DrugBefore_YES | 8.885e-03 | 2.447e-02 | 0.000e+00 | 0.2500 |
| Fusobacteriales | 4 | DrugBefore_NO | 0.000e+00 | 0.000e+00 | 0.000e+00 | 0.0000 |
| Fusobacteriales | 4 | DrugBefore_YES | 2.007e-04 | 4.855e-04 | 0.000e+00 | 0.4286 |
(1.6.1.2.5.2.2.2.1.1.1) Figure 948. Abundance. Data grouped by visit,Drug.Before.Diet. bar_stacked plot. Image file: plots/3234539f282.svg.
(1.6.1.2.5.2.2.2.1.1.1) Figure 949. Abundance. Data grouped by visit,Drug.Before.Diet. bar (sample mean) plot. Image file: plots/323502183c2.svg.
(1.6.1.2.5.2.2.2.1.1.1) Figure 950. Abundance. Data grouped by visit,Drug.Before.Diet. violin plot. Image file: plots/323e88ca43.svg.
(1.6.1.2.5.2.2.2.1.1.1) Figure 951. Abundance. Data grouped by visit,Drug.Before.Diet. boxplot plot. Image file: plots/3232fb84f9d.svg.
(1.6.1.2.5.2.2.2.1.2.1) Figure 952. Abundance. Data grouped by visit,Drug.Before.Diet. bar (sample mean) plot. Image file: plots/32333806823.svg.
(1.6.1.2.5.2.2.2.1.2.1) Figure 953. Abundance. Data grouped by visit,Drug.Before.Diet. violin plot. Image file: plots/32364fdd7d4.svg.
(1.6.1.2.5.2.2.2.1.2.1) Figure 954. Abundance. Data grouped by visit,Drug.Before.Diet. boxplot plot. Image file: plots/32390e9ad0.svg.
(1.6.1.2.5.2.2.2.2.1.1) Figure 955. Abundance. Data grouped by visit,Drug.Before.Diet. bar (sample mean) plot. Image file: plots/323b08828a.svg.
(1.6.1.2.5.2.2.2.2.1.1) Figure 956. Abundance. Data grouped by visit,Drug.Before.Diet. violin plot. Image file: plots/32370c4bb37.svg.
(1.6.1.2.5.2.2.2.2.1.1) Figure 957. Abundance. Data grouped by visit,Drug.Before.Diet. boxplot plot. Image file: plots/323402dd80b.svg.
(1.6.1.2.5.2.2.2.2.2.1) Figure 958. Abundance. Data grouped by visit,Drug.Before.Diet. bar (sample mean) plot. Image file: plots/32313a43358.svg.
(1.6.1.2.5.2.2.2.2.2.1) Figure 959. Abundance. Data grouped by visit,Drug.Before.Diet. violin plot. Image file: plots/3236c4287a6.svg.
(1.6.1.2.5.2.2.2.2.2.1) Figure 960. Abundance. Data grouped by visit,Drug.Before.Diet. boxplot plot. Image file: plots/32356bb69b6.svg.
Design: Rapporter Team © 2011-2014 | Backend: pander | License: AGPL3 or OSL | Styled with skeleton